Microevolution of Outbreak-Associated Middle East Respiratory Syndrome Coronavirus, South Korea, 2015.
Identifieur interne : 001142 ( Main/Exploration ); précédent : 001141; suivant : 001143Microevolution of Outbreak-Associated Middle East Respiratory Syndrome Coronavirus, South Korea, 2015.
Auteurs : Moon-Woo Seong ; So Yeon Kim ; Victor Max Corman ; Taek Soo Kim ; Sung Im Cho ; Man Jin Kim ; Seung Jun Lee ; Jee-Soo Lee ; Soo Hyun Seo ; Ji Soo Ahn ; Byeong Su Yu ; Nare Park ; Myoung-Don Oh ; Wan Beom Park ; Ji Yeon Lee ; Gayeon Kim ; Joon Sung Joh ; Ina Jeong ; Eui Chong Kim ; Christian Drosten ; Sung Sup ParkSource :
- Emerging infectious diseases [ 1080-6059 ] ; 2016.
Descripteurs français
- KwdFr :
- Adulte, Coronavirus du syndrome respiratoire du Moyen-Orient (génétique), Coronavirus du syndrome respiratoire du Moyen-Orient (isolement et purification), Flambées de maladies, Génome viral, Histoire du 21ème siècle, Humains, Infections à coronavirus (histoire), Infections à coronavirus (transmission), Infections à coronavirus (virologie), Infections à coronavirus (épidémiologie), Mâle, République de Corée (épidémiologie), Variation génétique, Évolution moléculaire.
- MESH :
- génétique : Coronavirus du syndrome respiratoire du Moyen-Orient.
- histoire : Infections à coronavirus.
- isolement et purification : Coronavirus du syndrome respiratoire du Moyen-Orient.
- virologie : Infections à coronavirus.
- épidémiologie : Infections à coronavirus, République de Corée.
- Adulte, Flambées de maladies, Génome viral, Histoire du 21ème siècle, Humains, Mâle, Variation génétique, Évolution moléculaire.
English descriptors
- KwdEn :
- Adult, Coronavirus Infections (epidemiology), Coronavirus Infections (history), Coronavirus Infections (transmission), Coronavirus Infections (virology), Disease Outbreaks, Evolution, Molecular, Genetic Variation, Genome, Viral, History, 21st Century, Humans, Male, Middle East Respiratory Syndrome Coronavirus (genetics), Middle East Respiratory Syndrome Coronavirus (isolation & purification), Republic of Korea (epidemiology).
- MESH :
- epidemiology : Coronavirus Infections, Republic of Korea.
- genetics : Middle East Respiratory Syndrome Coronavirus.
- history : Coronavirus Infections.
- isolation & purification : Middle East Respiratory Syndrome Coronavirus.
- transmission : Coronavirus Infections.
- virology : Coronavirus Infections.
- Adult, Disease Outbreaks, Evolution, Molecular, Genetic Variation, Genome, Viral, History, 21st Century, Humans, Male.
Abstract
During the 2015 Middle East respiratory syndrome coronavirus outbreak in South Korea, we sequenced full viral genomes of strains isolated from 4 patients early and late during infection. Patients represented at least 4 generations of transmission. We found no evidence of changes in the evolutionary rate and no reason to suspect adaptive changes in viral proteins.
DOI: 10.3201/eid2202.151700
PubMed: 26814649
Affiliations:
Links toward previous steps (curation, corpus...)
- to stream PubMed, to step Corpus: 001284
- to stream PubMed, to step Curation: 001284
- to stream PubMed, to step Checkpoint: 001004
- to stream Ncbi, to step Merge: 001457
- to stream Ncbi, to step Curation: 001457
- to stream Ncbi, to step Checkpoint: 001457
- to stream Main, to step Merge: 001146
- to stream Main, to step Curation: 001142
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Microevolution of Outbreak-Associated Middle East Respiratory Syndrome Coronavirus, South Korea, 2015.</title>
<author><name sortKey="Seong, Moon Woo" sort="Seong, Moon Woo" uniqKey="Seong M" first="Moon-Woo" last="Seong">Moon-Woo Seong</name>
</author>
<author><name sortKey="Kim, So Yeon" sort="Kim, So Yeon" uniqKey="Kim S" first="So Yeon" last="Kim">So Yeon Kim</name>
</author>
<author><name sortKey="Corman, Victor Max" sort="Corman, Victor Max" uniqKey="Corman V" first="Victor Max" last="Corman">Victor Max Corman</name>
</author>
<author><name sortKey="Kim, Taek Soo" sort="Kim, Taek Soo" uniqKey="Kim T" first="Taek Soo" last="Kim">Taek Soo Kim</name>
</author>
<author><name sortKey="Cho, Sung Im" sort="Cho, Sung Im" uniqKey="Cho S" first="Sung Im" last="Cho">Sung Im Cho</name>
</author>
<author><name sortKey="Kim, Man Jin" sort="Kim, Man Jin" uniqKey="Kim M" first="Man Jin" last="Kim">Man Jin Kim</name>
</author>
<author><name sortKey="Lee, Seung Jun" sort="Lee, Seung Jun" uniqKey="Lee S" first="Seung Jun" last="Lee">Seung Jun Lee</name>
</author>
<author><name sortKey="Lee, Jee Soo" sort="Lee, Jee Soo" uniqKey="Lee J" first="Jee-Soo" last="Lee">Jee-Soo Lee</name>
</author>
<author><name sortKey="Seo, Soo Hyun" sort="Seo, Soo Hyun" uniqKey="Seo S" first="Soo Hyun" last="Seo">Soo Hyun Seo</name>
</author>
<author><name sortKey="Ahn, Ji Soo" sort="Ahn, Ji Soo" uniqKey="Ahn J" first="Ji Soo" last="Ahn">Ji Soo Ahn</name>
</author>
<author><name sortKey="Yu, Byeong Su" sort="Yu, Byeong Su" uniqKey="Yu B" first="Byeong Su" last="Yu">Byeong Su Yu</name>
</author>
<author><name sortKey="Park, Nare" sort="Park, Nare" uniqKey="Park N" first="Nare" last="Park">Nare Park</name>
</author>
<author><name sortKey="Oh, Myoung Don" sort="Oh, Myoung Don" uniqKey="Oh M" first="Myoung-Don" last="Oh">Myoung-Don Oh</name>
</author>
<author><name sortKey="Park, Wan Beom" sort="Park, Wan Beom" uniqKey="Park W" first="Wan Beom" last="Park">Wan Beom Park</name>
</author>
<author><name sortKey="Lee, Ji Yeon" sort="Lee, Ji Yeon" uniqKey="Lee J" first="Ji Yeon" last="Lee">Ji Yeon Lee</name>
</author>
<author><name sortKey="Kim, Gayeon" sort="Kim, Gayeon" uniqKey="Kim G" first="Gayeon" last="Kim">Gayeon Kim</name>
</author>
<author><name sortKey="Joh, Joon Sung" sort="Joh, Joon Sung" uniqKey="Joh J" first="Joon Sung" last="Joh">Joon Sung Joh</name>
</author>
<author><name sortKey="Jeong, Ina" sort="Jeong, Ina" uniqKey="Jeong I" first="Ina" last="Jeong">Ina Jeong</name>
</author>
<author><name sortKey="Kim, Eui Chong" sort="Kim, Eui Chong" uniqKey="Kim E" first="Eui Chong" last="Kim">Eui Chong Kim</name>
</author>
<author><name sortKey="Drosten, Christian" sort="Drosten, Christian" uniqKey="Drosten C" first="Christian" last="Drosten">Christian Drosten</name>
</author>
<author><name sortKey="Park, Sung Sup" sort="Park, Sung Sup" uniqKey="Park S" first="Sung Sup" last="Park">Sung Sup Park</name>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PubMed</idno>
<date when="2016">2016</date>
<idno type="RBID">pubmed:26814649</idno>
<idno type="pmid">26814649</idno>
<idno type="doi">10.3201/eid2202.151700</idno>
<idno type="wicri:Area/PubMed/Corpus">001284</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">001284</idno>
<idno type="wicri:Area/PubMed/Curation">001284</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">001284</idno>
<idno type="wicri:Area/PubMed/Checkpoint">001004</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">001004</idno>
<idno type="wicri:Area/Ncbi/Merge">001457</idno>
<idno type="wicri:Area/Ncbi/Curation">001457</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">001457</idno>
<idno type="wicri:Area/Main/Merge">001146</idno>
<idno type="wicri:Area/Main/Curation">001142</idno>
<idno type="wicri:Area/Main/Exploration">001142</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en">Microevolution of Outbreak-Associated Middle East Respiratory Syndrome Coronavirus, South Korea, 2015.</title>
<author><name sortKey="Seong, Moon Woo" sort="Seong, Moon Woo" uniqKey="Seong M" first="Moon-Woo" last="Seong">Moon-Woo Seong</name>
</author>
<author><name sortKey="Kim, So Yeon" sort="Kim, So Yeon" uniqKey="Kim S" first="So Yeon" last="Kim">So Yeon Kim</name>
</author>
<author><name sortKey="Corman, Victor Max" sort="Corman, Victor Max" uniqKey="Corman V" first="Victor Max" last="Corman">Victor Max Corman</name>
</author>
<author><name sortKey="Kim, Taek Soo" sort="Kim, Taek Soo" uniqKey="Kim T" first="Taek Soo" last="Kim">Taek Soo Kim</name>
</author>
<author><name sortKey="Cho, Sung Im" sort="Cho, Sung Im" uniqKey="Cho S" first="Sung Im" last="Cho">Sung Im Cho</name>
</author>
<author><name sortKey="Kim, Man Jin" sort="Kim, Man Jin" uniqKey="Kim M" first="Man Jin" last="Kim">Man Jin Kim</name>
</author>
<author><name sortKey="Lee, Seung Jun" sort="Lee, Seung Jun" uniqKey="Lee S" first="Seung Jun" last="Lee">Seung Jun Lee</name>
</author>
<author><name sortKey="Lee, Jee Soo" sort="Lee, Jee Soo" uniqKey="Lee J" first="Jee-Soo" last="Lee">Jee-Soo Lee</name>
</author>
<author><name sortKey="Seo, Soo Hyun" sort="Seo, Soo Hyun" uniqKey="Seo S" first="Soo Hyun" last="Seo">Soo Hyun Seo</name>
</author>
<author><name sortKey="Ahn, Ji Soo" sort="Ahn, Ji Soo" uniqKey="Ahn J" first="Ji Soo" last="Ahn">Ji Soo Ahn</name>
</author>
<author><name sortKey="Yu, Byeong Su" sort="Yu, Byeong Su" uniqKey="Yu B" first="Byeong Su" last="Yu">Byeong Su Yu</name>
</author>
<author><name sortKey="Park, Nare" sort="Park, Nare" uniqKey="Park N" first="Nare" last="Park">Nare Park</name>
</author>
<author><name sortKey="Oh, Myoung Don" sort="Oh, Myoung Don" uniqKey="Oh M" first="Myoung-Don" last="Oh">Myoung-Don Oh</name>
</author>
<author><name sortKey="Park, Wan Beom" sort="Park, Wan Beom" uniqKey="Park W" first="Wan Beom" last="Park">Wan Beom Park</name>
</author>
<author><name sortKey="Lee, Ji Yeon" sort="Lee, Ji Yeon" uniqKey="Lee J" first="Ji Yeon" last="Lee">Ji Yeon Lee</name>
</author>
<author><name sortKey="Kim, Gayeon" sort="Kim, Gayeon" uniqKey="Kim G" first="Gayeon" last="Kim">Gayeon Kim</name>
</author>
<author><name sortKey="Joh, Joon Sung" sort="Joh, Joon Sung" uniqKey="Joh J" first="Joon Sung" last="Joh">Joon Sung Joh</name>
</author>
<author><name sortKey="Jeong, Ina" sort="Jeong, Ina" uniqKey="Jeong I" first="Ina" last="Jeong">Ina Jeong</name>
</author>
<author><name sortKey="Kim, Eui Chong" sort="Kim, Eui Chong" uniqKey="Kim E" first="Eui Chong" last="Kim">Eui Chong Kim</name>
</author>
<author><name sortKey="Drosten, Christian" sort="Drosten, Christian" uniqKey="Drosten C" first="Christian" last="Drosten">Christian Drosten</name>
</author>
<author><name sortKey="Park, Sung Sup" sort="Park, Sung Sup" uniqKey="Park S" first="Sung Sup" last="Park">Sung Sup Park</name>
</author>
</analytic>
<series><title level="j">Emerging infectious diseases</title>
<idno type="eISSN">1080-6059</idno>
<imprint><date when="2016" type="published">2016</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Adult</term>
<term>Coronavirus Infections (epidemiology)</term>
<term>Coronavirus Infections (history)</term>
<term>Coronavirus Infections (transmission)</term>
<term>Coronavirus Infections (virology)</term>
<term>Disease Outbreaks</term>
<term>Evolution, Molecular</term>
<term>Genetic Variation</term>
<term>Genome, Viral</term>
<term>History, 21st Century</term>
<term>Humans</term>
<term>Male</term>
<term>Middle East Respiratory Syndrome Coronavirus (genetics)</term>
<term>Middle East Respiratory Syndrome Coronavirus (isolation & purification)</term>
<term>Republic of Korea (epidemiology)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>Adulte</term>
<term>Coronavirus du syndrome respiratoire du Moyen-Orient (génétique)</term>
<term>Coronavirus du syndrome respiratoire du Moyen-Orient (isolement et purification)</term>
<term>Flambées de maladies</term>
<term>Génome viral</term>
<term>Histoire du 21ème siècle</term>
<term>Humains</term>
<term>Infections à coronavirus (histoire)</term>
<term>Infections à coronavirus (transmission)</term>
<term>Infections à coronavirus (virologie)</term>
<term>Infections à coronavirus (épidémiologie)</term>
<term>Mâle</term>
<term>République de Corée (épidémiologie)</term>
<term>Variation génétique</term>
<term>Évolution moléculaire</term>
</keywords>
<keywords scheme="MESH" qualifier="epidemiology" xml:lang="en"><term>Coronavirus Infections</term>
<term>Republic of Korea</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Middle East Respiratory Syndrome Coronavirus</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Coronavirus du syndrome respiratoire du Moyen-Orient</term>
</keywords>
<keywords scheme="MESH" qualifier="histoire" xml:lang="fr"><term>Infections à coronavirus</term>
</keywords>
<keywords scheme="MESH" qualifier="history" xml:lang="en"><term>Coronavirus Infections</term>
</keywords>
<keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Middle East Respiratory Syndrome Coronavirus</term>
</keywords>
<keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Coronavirus du syndrome respiratoire du Moyen-Orient</term>
</keywords>
<keywords scheme="MESH" qualifier="transmission" xml:lang="en"><term>Coronavirus Infections</term>
</keywords>
<keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Infections à coronavirus</term>
</keywords>
<keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Coronavirus Infections</term>
</keywords>
<keywords scheme="MESH" qualifier="épidémiologie" xml:lang="fr"><term>Infections à coronavirus</term>
<term>République de Corée</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Adult</term>
<term>Disease Outbreaks</term>
<term>Evolution, Molecular</term>
<term>Genetic Variation</term>
<term>Genome, Viral</term>
<term>History, 21st Century</term>
<term>Humans</term>
<term>Male</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Adulte</term>
<term>Flambées de maladies</term>
<term>Génome viral</term>
<term>Histoire du 21ème siècle</term>
<term>Humains</term>
<term>Mâle</term>
<term>Variation génétique</term>
<term>Évolution moléculaire</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">During the 2015 Middle East respiratory syndrome coronavirus outbreak in South Korea, we sequenced full viral genomes of strains isolated from 4 patients early and late during infection. Patients represented at least 4 generations of transmission. We found no evidence of changes in the evolutionary rate and no reason to suspect adaptive changes in viral proteins. </div>
</front>
</TEI>
<affiliations><list></list>
<tree><noCountry><name sortKey="Ahn, Ji Soo" sort="Ahn, Ji Soo" uniqKey="Ahn J" first="Ji Soo" last="Ahn">Ji Soo Ahn</name>
<name sortKey="Cho, Sung Im" sort="Cho, Sung Im" uniqKey="Cho S" first="Sung Im" last="Cho">Sung Im Cho</name>
<name sortKey="Corman, Victor Max" sort="Corman, Victor Max" uniqKey="Corman V" first="Victor Max" last="Corman">Victor Max Corman</name>
<name sortKey="Drosten, Christian" sort="Drosten, Christian" uniqKey="Drosten C" first="Christian" last="Drosten">Christian Drosten</name>
<name sortKey="Jeong, Ina" sort="Jeong, Ina" uniqKey="Jeong I" first="Ina" last="Jeong">Ina Jeong</name>
<name sortKey="Joh, Joon Sung" sort="Joh, Joon Sung" uniqKey="Joh J" first="Joon Sung" last="Joh">Joon Sung Joh</name>
<name sortKey="Kim, Eui Chong" sort="Kim, Eui Chong" uniqKey="Kim E" first="Eui Chong" last="Kim">Eui Chong Kim</name>
<name sortKey="Kim, Gayeon" sort="Kim, Gayeon" uniqKey="Kim G" first="Gayeon" last="Kim">Gayeon Kim</name>
<name sortKey="Kim, Man Jin" sort="Kim, Man Jin" uniqKey="Kim M" first="Man Jin" last="Kim">Man Jin Kim</name>
<name sortKey="Kim, So Yeon" sort="Kim, So Yeon" uniqKey="Kim S" first="So Yeon" last="Kim">So Yeon Kim</name>
<name sortKey="Kim, Taek Soo" sort="Kim, Taek Soo" uniqKey="Kim T" first="Taek Soo" last="Kim">Taek Soo Kim</name>
<name sortKey="Lee, Jee Soo" sort="Lee, Jee Soo" uniqKey="Lee J" first="Jee-Soo" last="Lee">Jee-Soo Lee</name>
<name sortKey="Lee, Ji Yeon" sort="Lee, Ji Yeon" uniqKey="Lee J" first="Ji Yeon" last="Lee">Ji Yeon Lee</name>
<name sortKey="Lee, Seung Jun" sort="Lee, Seung Jun" uniqKey="Lee S" first="Seung Jun" last="Lee">Seung Jun Lee</name>
<name sortKey="Oh, Myoung Don" sort="Oh, Myoung Don" uniqKey="Oh M" first="Myoung-Don" last="Oh">Myoung-Don Oh</name>
<name sortKey="Park, Nare" sort="Park, Nare" uniqKey="Park N" first="Nare" last="Park">Nare Park</name>
<name sortKey="Park, Sung Sup" sort="Park, Sung Sup" uniqKey="Park S" first="Sung Sup" last="Park">Sung Sup Park</name>
<name sortKey="Park, Wan Beom" sort="Park, Wan Beom" uniqKey="Park W" first="Wan Beom" last="Park">Wan Beom Park</name>
<name sortKey="Seo, Soo Hyun" sort="Seo, Soo Hyun" uniqKey="Seo S" first="Soo Hyun" last="Seo">Soo Hyun Seo</name>
<name sortKey="Seong, Moon Woo" sort="Seong, Moon Woo" uniqKey="Seong M" first="Moon-Woo" last="Seong">Moon-Woo Seong</name>
<name sortKey="Yu, Byeong Su" sort="Yu, Byeong Su" uniqKey="Yu B" first="Byeong Su" last="Yu">Byeong Su Yu</name>
</noCountry>
</tree>
</affiliations>
</record>
Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Sante/explor/MersV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 001142 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 001142 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien |wiki= Sante |area= MersV1 |flux= Main |étape= Exploration |type= RBID |clé= pubmed:26814649 |texte= Microevolution of Outbreak-Associated Middle East Respiratory Syndrome Coronavirus, South Korea, 2015. }}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:26814649" \ | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \ | NlmPubMed2Wicri -a MersV1
This area was generated with Dilib version V0.6.33. |